Protein–RNA interactions for Protein: P31001

Des, Desmin, mousemouse

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DesP31001 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
DesP31001 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DesP31001 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DesP31001 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
DesP31001 Notumos-201ENSMUST00000151998 2659 ntBASIC21.36■■□□□ 1.01
DesP31001 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DesP31001 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DesP31001 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DesP31001 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DesP31001 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
DesP31001 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.36■■□□□ 1.01
DesP31001 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DesP31001 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DesP31001 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
DesP31001 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.35■■□□□ 1.01
DesP31001 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DesP31001 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DesP31001 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DesP31001 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DesP31001 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DesP31001 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DesP31001 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DesP31001 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DesP31001 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DesP31001 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DesP31001 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.33■■□□□ 1.01
DesP31001 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DesP31001 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DesP31001 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.33■■□□□ 1.01
DesP31001 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.33■■□□□ 1
DesP31001 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
DesP31001 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
DesP31001 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DesP31001 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DesP31001 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.32■■□□□ 1
DesP31001 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DesP31001 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.32■■□□□ 1
DesP31001 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.32■■□□□ 1
DesP31001 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.32■■□□□ 1
DesP31001 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
DesP31001 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.31■■□□□ 1
DesP31001 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DesP31001 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.31■■□□□ 1
DesP31001 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.31■■□□□ 1
DesP31001 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
DesP31001 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
DesP31001 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DesP31001 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DesP31001 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.31■■□□□ 1
DesP31001 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DesP31001 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DesP31001 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
DesP31001 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DesP31001 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DesP31001 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DesP31001 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
DesP31001 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.3■■□□□ 1
DesP31001 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
DesP31001 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.29■■□□□ 1
DesP31001 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.29■■□□□ 1
DesP31001 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DesP31001 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
DesP31001 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.29■■□□□ 1
DesP31001 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DesP31001 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.28■■□□□ 1
DesP31001 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
DesP31001 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.28■■□□□ 1
DesP31001 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DesP31001 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DesP31001 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
DesP31001 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.27■■□□□ 1
DesP31001 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DesP31001 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
DesP31001 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.27■■□□□ 1
DesP31001 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DesP31001 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.26■□□□□ 0.99
DesP31001 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.26■□□□□ 0.99
DesP31001 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
DesP31001 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DesP31001 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DesP31001 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.25■□□□□ 0.99
DesP31001 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DesP31001 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DesP31001 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.25■□□□□ 0.99
DesP31001 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DesP31001 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms