Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cd40P27512 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd40P27512 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd40P27512 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cd40P27512 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cd40P27512 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cd40P27512 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.86■□□□□ 0.61
Cd40P27512 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cd40P27512 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd40P27512 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cd40P27512 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cd40P27512 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cd40P27512 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd40P27512 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd40P27512 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cd40P27512 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd40P27512 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd40P27512 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.84■□□□□ 0.61
Cd40P27512 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.84■□□□□ 0.61
Cd40P27512 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.84■□□□□ 0.61
Cd40P27512 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.84■□□□□ 0.61
Cd40P27512 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd40P27512 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd40P27512 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd40P27512 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.83■□□□□ 0.61
Cd40P27512 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd40P27512 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd40P27512 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.83■□□□□ 0.6
Cd40P27512 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.83■□□□□ 0.6
Cd40P27512 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd40P27512 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.83■□□□□ 0.6
Cd40P27512 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd40P27512 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd40P27512 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.82■□□□□ 0.6
Cd40P27512 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cd40P27512 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cd40P27512 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd40P27512 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd40P27512 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.81■□□□□ 0.6
Cd40P27512 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd40P27512 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd40P27512 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd40P27512 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd40P27512 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cd40P27512 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd40P27512 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Cd40P27512 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd40P27512 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd40P27512 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.8■□□□□ 0.6
Cd40P27512 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.8■□□□□ 0.6
Cd40P27512 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.8■□□□□ 0.6
Cd40P27512 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.8■□□□□ 0.6
Cd40P27512 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd40P27512 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cd40P27512 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.8■□□□□ 0.6
Cd40P27512 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd40P27512 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.79■□□□□ 0.6
Cd40P27512 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd40P27512 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd40P27512 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd40P27512 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.79■□□□□ 0.6
Cd40P27512 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.79■□□□□ 0.6
Cd40P27512 Gm7417-201ENSMUST00000192950 473 ntBASIC18.79■□□□□ 0.6
Cd40P27512 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd40P27512 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd40P27512 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.78■□□□□ 0.6
Cd40P27512 Etf1-202ENSMUST00000180351 108 ntBASIC18.78■□□□□ 0.6
Cd40P27512 Gm9959-201ENSMUST00000068277 390 ntBASIC18.78■□□□□ 0.6
Cd40P27512 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd40P27512 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.78■□□□□ 0.6
Cd40P27512 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms