Protein–RNA interactions for Protein: P14097

Ccl4, C-C motif chemokine 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl4P14097 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.33■■□□□ 1.01
Ccl4P14097 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl4P14097 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccl4P14097 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl4P14097 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccl4P14097 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.32■■□□□ 1
Ccl4P14097 Gm26833-201ENSMUST00000180899 440 ntBASIC21.32■■□□□ 1
Ccl4P14097 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.32■■□□□ 1
Ccl4P14097 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl4P14097 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccl4P14097 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.32■■□□□ 1
Ccl4P14097 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl4P14097 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl4P14097 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl4P14097 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ccl4P14097 Gm7143-201ENSMUST00000222811 859 ntBASIC21.31■■□□□ 1
Ccl4P14097 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl4P14097 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl4P14097 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccl4P14097 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl4P14097 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl4P14097 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Ccl4P14097 Gm42642-201ENSMUST00000200683 355 ntBASIC21.3■■□□□ 1
Ccl4P14097 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.3■■□□□ 1
Ccl4P14097 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl4P14097 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ccl4P14097 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccl4P14097 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl4P14097 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl4P14097 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl4P14097 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.29■■□□□ 1
Ccl4P14097 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl4P14097 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl4P14097 Gm43060-201ENSMUST00000200621 289 ntBASIC21.29■■□□□ 1
Ccl4P14097 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccl4P14097 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl4P14097 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccl4P14097 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl4P14097 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl4P14097 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl4P14097 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl4P14097 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccl4P14097 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl4P14097 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.27■■□□□ 1
Ccl4P14097 Gm37179-201ENSMUST00000194862 823 ntBASIC21.27■■□□□ 1
Ccl4P14097 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccl4P14097 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccl4P14097 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ccl4P14097 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccl4P14097 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccl4P14097 Gm10849-201ENSMUST00000100397 618 ntBASIC21.26■□□□□ 0.99
Ccl4P14097 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ccl4P14097 Gm27011-201ENSMUST00000182352 972 ntBASIC21.26■□□□□ 0.99
Ccl4P14097 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccl4P14097 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccl4P14097 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl4P14097 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl4P14097 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.25■□□□□ 0.99
Ccl4P14097 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.25■□□□□ 0.99
Ccl4P14097 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.25■□□□□ 0.99
Ccl4P14097 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl4P14097 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl4P14097 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Ccl4P14097 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl4P14097 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl4P14097 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Ccl4P14097 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl4P14097 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl4P14097 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccl4P14097 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ccl4P14097 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl4P14097 Spcs1-204ENSMUST00000226782 949 ntBASIC21.24■□□□□ 0.99
Ccl4P14097 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl4P14097 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl4P14097 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ccl4P14097 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ccl4P14097 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ccl4P14097 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Ccl4P14097 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl4P14097 Gm40848-201ENSMUST00000221998 324 ntBASIC21.23■□□□□ 0.99
Ccl4P14097 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Ccl4P14097 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Ccl4P14097 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccl4P14097 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl4P14097 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl4P14097 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl4P14097 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.22■□□□□ 0.99
Ccl4P14097 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl4P14097 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ccl4P14097 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl4P14097 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl4P14097 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccl4P14097 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccl4P14097 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.21■□□□□ 0.99
Ccl4P14097 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Ccl4P14097 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccl4P14097 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccl4P14097 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccl4P14097 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccl4P14097 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms