Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rb1P13405 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rb1P13405 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rb1P13405 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.02■□□□□ 0.96
Rb1P13405 Serp2-204ENSMUST00000228055 705 ntBASIC21.02■□□□□ 0.96
Rb1P13405 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.02■□□□□ 0.96
Rb1P13405 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rb1P13405 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rb1P13405 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rb1P13405 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rb1P13405 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Rb1P13405 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.01■□□□□ 0.95
Rb1P13405 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rb1P13405 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rb1P13405 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rb1P13405 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rb1P13405 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rb1P13405 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rb1P13405 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rb1P13405 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21■□□□□ 0.95
Rb1P13405 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21■□□□□ 0.95
Rb1P13405 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rb1P13405 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rb1P13405 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rb1P13405 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21■□□□□ 0.95
Rb1P13405 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rb1P13405 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rb1P13405 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rb1P13405 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.99■□□□□ 0.95
Rb1P13405 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rb1P13405 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.98■□□□□ 0.95
Rb1P13405 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.98■□□□□ 0.95
Rb1P13405 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.98■□□□□ 0.95
Rb1P13405 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.98■□□□□ 0.95
Rb1P13405 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rb1P13405 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rb1P13405 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rb1P13405 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rb1P13405 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.97■□□□□ 0.95
Rb1P13405 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Rb1P13405 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.97■□□□□ 0.95
Rb1P13405 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rb1P13405 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rb1P13405 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rb1P13405 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rb1P13405 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rb1P13405 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rb1P13405 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rb1P13405 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rb1P13405 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rb1P13405 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rb1P13405 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rb1P13405 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rb1P13405 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rb1P13405 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.95■□□□□ 0.94
Rb1P13405 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rb1P13405 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.95■□□□□ 0.94
Rb1P13405 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.95■□□□□ 0.94
Rb1P13405 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rb1P13405 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rb1P13405 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rb1P13405 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rb1P13405 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rb1P13405 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rb1P13405 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rb1P13405 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rb1P13405 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
Rb1P13405 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rb1P13405 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rb1P13405 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rb1P13405 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rb1P13405 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rb1P13405 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rb1P13405 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rb1P13405 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rb1P13405 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.92■□□□□ 0.94
Rb1P13405 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rb1P13405 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.92■□□□□ 0.94
Rb1P13405 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rb1P13405 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rb1P13405 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rb1P13405 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rb1P13405 Gm27454-201ENSMUST00000185090 204 ntBASIC20.91■□□□□ 0.94
Rb1P13405 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rb1P13405 Golgb1-201ENSMUST00000023534 498 ntBASIC20.91■□□□□ 0.94
Rb1P13405 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Rb1P13405 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rb1P13405 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rb1P13405 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rb1P13405 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rb1P13405 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.9■□□□□ 0.94
Rb1P13405 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rb1P13405 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms