Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NefmP08553 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NefmP08553 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NefmP08553 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NefmP08553 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.74■■■□□ 2.51
NefmP08553 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NefmP08553 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC30.74■■■□□ 2.51
NefmP08553 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NefmP08553 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NefmP08553 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
NefmP08553 Gm27502-201ENSMUST00000183495 199 ntBASIC30.73■■■□□ 2.51
NefmP08553 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NefmP08553 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NefmP08553 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NefmP08553 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NefmP08553 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
NefmP08553 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
NefmP08553 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NefmP08553 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NefmP08553 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
NefmP08553 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
NefmP08553 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
NefmP08553 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
NefmP08553 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NefmP08553 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
NefmP08553 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NefmP08553 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
NefmP08553 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
NefmP08553 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NefmP08553 Gm34220-201ENSMUST00000223001 2709 ntBASIC30.69■■■□□ 2.5
NefmP08553 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NefmP08553 Gm43592-201ENSMUST00000196922 1165 ntBASIC30.69■■■□□ 2.5
NefmP08553 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NefmP08553 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30.69■■■□□ 2.5
NefmP08553 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NefmP08553 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NefmP08553 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
NefmP08553 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NefmP08553 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NefmP08553 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
NefmP08553 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NefmP08553 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NefmP08553 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NefmP08553 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC30.68■■■□□ 2.5
NefmP08553 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC30.68■■■□□ 2.5
NefmP08553 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
NefmP08553 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NefmP08553 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NefmP08553 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NefmP08553 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NefmP08553 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NefmP08553 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NefmP08553 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NefmP08553 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30.65■■■□□ 2.5
NefmP08553 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NefmP08553 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NefmP08553 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
NefmP08553 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NefmP08553 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NefmP08553 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
NefmP08553 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.49
NefmP08553 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NefmP08553 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NefmP08553 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
NefmP08553 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NefmP08553 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NefmP08553 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30.63■■■□□ 2.49
NefmP08553 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NefmP08553 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC30.62■■■□□ 2.49
NefmP08553 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
NefmP08553 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
NefmP08553 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NefmP08553 Gm7332-201ENSMUST00000118351 454 ntBASIC30.62■■■□□ 2.49
NefmP08553 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NefmP08553 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
NefmP08553 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NefmP08553 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NefmP08553 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NefmP08553 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NefmP08553 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NefmP08553 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NefmP08553 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
NefmP08553 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC30.6■■■□□ 2.49
NefmP08553 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NefmP08553 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NefmP08553 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NefmP08553 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
NefmP08553 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
NefmP08553 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 AC152827.1-201ENSMUST00000221143 2189 ntBASIC30.59■■■□□ 2.49
NefmP08553 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NefmP08553 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NefmP08553 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
NefmP08553 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms