Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa4P06798 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa4P06798 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa4P06798 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxa4P06798 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxa4P06798 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxa4P06798 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.58■□□□□ 0.89
Hoxa4P06798 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Hoxa4P06798 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
Hoxa4P06798 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxa4P06798 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hoxa4P06798 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa4P06798 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa4P06798 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.57■□□□□ 0.88
Hoxa4P06798 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa4P06798 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hoxa4P06798 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Hoxa4P06798 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.56■□□□□ 0.88
Hoxa4P06798 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa4P06798 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hoxa4P06798 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa4P06798 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxa4P06798 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Hoxa4P06798 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxa4P06798 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxa4P06798 Gm7143-201ENSMUST00000222811 859 ntBASIC20.55■□□□□ 0.88
Hoxa4P06798 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Hoxa4P06798 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hoxa4P06798 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.55■□□□□ 0.88
Hoxa4P06798 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa4P06798 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.54■□□□□ 0.88
Hoxa4P06798 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hoxa4P06798 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa4P06798 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa4P06798 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.54■□□□□ 0.88
Hoxa4P06798 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.54■□□□□ 0.88
Hoxa4P06798 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.54■□□□□ 0.88
Hoxa4P06798 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hoxa4P06798 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.54■□□□□ 0.88
Hoxa4P06798 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa4P06798 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa4P06798 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa4P06798 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxa4P06798 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Hoxa4P06798 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxa4P06798 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.53■□□□□ 0.88
Hoxa4P06798 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hoxa4P06798 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa4P06798 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa4P06798 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa4P06798 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxa4P06798 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa4P06798 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa4P06798 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.51■□□□□ 0.87
Hoxa4P06798 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa4P06798 Gm9870-201ENSMUST00000063874 645 ntBASIC20.51■□□□□ 0.87
Hoxa4P06798 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxa4P06798 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hoxa4P06798 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.51■□□□□ 0.87
Hoxa4P06798 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxa4P06798 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxa4P06798 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxa4P06798 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.5■□□□□ 0.87
Hoxa4P06798 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.5■□□□□ 0.87
Hoxa4P06798 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hoxa4P06798 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxa4P06798 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.5■□□□□ 0.87
Hoxa4P06798 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.49■□□□□ 0.87
Hoxa4P06798 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Hoxa4P06798 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Hoxa4P06798 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxa4P06798 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxa4P06798 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hoxa4P06798 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxa4P06798 Gm12922-201ENSMUST00000120626 809 ntBASIC20.48■□□□□ 0.87
Hoxa4P06798 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hoxa4P06798 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxa4P06798 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxa4P06798 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hoxa4P06798 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxa4P06798 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms