Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hbb-b1P02088 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Gm8109-201ENSMUST00000194076 746 ntBASIC14.66□□□□□ -0.06
Hbb-b1P02088 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hbb-b1P02088 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.65□□□□□ -0.06
Hbb-b1P02088 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hbb-b1P02088 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hbb-b1P02088 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hbb-b1P02088 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hbb-b1P02088 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hbb-b1P02088 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hbb-b1P02088 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.64□□□□□ -0.07
Hbb-b1P02088 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hbb-b1P02088 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.64□□□□□ -0.07
Hbb-b1P02088 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hbb-b1P02088 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hbb-b1P02088 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Gm37136-201ENSMUST00000194368 194 ntBASIC14.62□□□□□ -0.07
Hbb-b1P02088 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hbb-b1P02088 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hbb-b1P02088 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hbb-b1P02088 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hbb-b1P02088 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hbb-b1P02088 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms