Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.9■□□□□ 0.62
P01808 Gm40881-201ENSMUST00000223397 166 ntBASIC18.9■□□□□ 0.62
P01808 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.9■□□□□ 0.62
P01808 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01808 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01808 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01808 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01808 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
P01808 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
P01808 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01808 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.89■□□□□ 0.61
P01808 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01808 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.89■□□□□ 0.61
P01808 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01808 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.89■□□□□ 0.61
P01808 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01808 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P01808 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01808 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
P01808 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01808 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
P01808 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
P01808 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.88■□□□□ 0.61
P01808 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
P01808 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01808 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01808 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01808 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01808 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01808 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.87■□□□□ 0.61
P01808 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.87■□□□□ 0.61
P01808 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01808 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01808 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01808 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01808 Gm9959-201ENSMUST00000068277 390 ntBASIC18.86■□□□□ 0.61
P01808 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01808 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01808 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
P01808 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.85■□□□□ 0.61
P01808 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.85■□□□□ 0.61
P01808 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.85■□□□□ 0.61
P01808 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01808 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01808 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.84■□□□□ 0.61
P01808 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01808 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.83■□□□□ 0.61
P01808 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P01808 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
P01808 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01808 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01808 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01808 Etf1-202ENSMUST00000180351 108 ntBASIC18.82■□□□□ 0.6
P01808 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01808 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.82■□□□□ 0.6
P01808 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01808 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.81■□□□□ 0.6
P01808 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01808 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01808 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01808 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01808 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.81■□□□□ 0.6
P01808 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01808 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
P01808 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01808 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
P01808 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.8■□□□□ 0.6
P01808 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.8■□□□□ 0.6
P01808 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
P01808 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01808 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
P01808 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01808 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01808 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01808 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
P01808 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01808 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.79■□□□□ 0.6
P01808 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.79■□□□□ 0.6
P01808 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
P01808 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01808 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.79■□□□□ 0.6
P01808 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01808 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01808 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01808 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms