Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Igh-VJ558P01758 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Igh-VJ558P01758 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Igh-VJ558P01758 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Igh-VJ558P01758 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igh-VJ558P01758 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igh-VJ558P01758 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Igh-VJ558P01758 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igh-VJ558P01758 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igh-VJ558P01758 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igh-VJ558P01758 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Igh-VJ558P01758 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.07■□□□□ 0.48
Igh-VJ558P01758 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igh-VJ558P01758 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igh-VJ558P01758 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igh-VJ558P01758 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.06■□□□□ 0.48
Igh-VJ558P01758 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igh-VJ558P01758 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igh-VJ558P01758 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Igh-VJ558P01758 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.05■□□□□ 0.48
Igh-VJ558P01758 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igh-VJ558P01758 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igh-VJ558P01758 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Igh-VJ558P01758 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igh-VJ558P01758 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igh-VJ558P01758 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Igh-VJ558P01758 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igh-VJ558P01758 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igh-VJ558P01758 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igh-VJ558P01758 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Igh-VJ558P01758 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igh-VJ558P01758 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Igh-VJ558P01758 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Igh-VJ558P01758 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18■□□□□ 0.47
Igh-VJ558P01758 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igh-VJ558P01758 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igh-VJ558P01758 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Gm10232-201ENSMUST00000089221 720 ntBASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igh-VJ558P01758 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 Gm10399-202ENSMUST00000202768 748 ntBASIC17.97■□□□□ 0.47
Igh-VJ558P01758 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igh-VJ558P01758 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms