Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Abcd4O89016 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Abcd4O89016 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Abcd4O89016 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd4O89016 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd4O89016 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd4O89016 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd4O89016 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd4O89016 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd4O89016 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Abcd4O89016 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Abcd4O89016 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd4O89016 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd4O89016 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd4O89016 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd4O89016 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd4O89016 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.69■□□□□ 0.58
Abcd4O89016 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd4O89016 Gm9847-201ENSMUST00000052528 599 ntBASIC18.69■□□□□ 0.58
Abcd4O89016 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Abcd4O89016 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd4O89016 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Abcd4O89016 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Abcd4O89016 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.68■□□□□ 0.58
Abcd4O89016 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Abcd4O89016 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.68■□□□□ 0.58
Abcd4O89016 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd4O89016 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd4O89016 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd4O89016 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Abcd4O89016 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd4O89016 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd4O89016 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.68■□□□□ 0.58
Abcd4O89016 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd4O89016 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Abcd4O89016 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd4O89016 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd4O89016 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd4O89016 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd4O89016 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd4O89016 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Abcd4O89016 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd4O89016 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.67■□□□□ 0.58
Abcd4O89016 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcd4O89016 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcd4O89016 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.66■□□□□ 0.58
Abcd4O89016 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Abcd4O89016 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcd4O89016 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcd4O89016 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcd4O89016 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd4O89016 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd4O89016 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd4O89016 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Abcd4O89016 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd4O89016 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.65■□□□□ 0.58
Abcd4O89016 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd4O89016 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Abcd4O89016 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd4O89016 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Abcd4O89016 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Abcd4O89016 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd4O89016 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Abcd4O89016 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd4O89016 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd4O89016 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd4O89016 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd4O89016 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Abcd4O89016 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.64■□□□□ 0.57
Abcd4O89016 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd4O89016 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd4O89016 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd4O89016 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd4O89016 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd4O89016 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Abcd4O89016 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Abcd4O89016 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.62■□□□□ 0.57
Abcd4O89016 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcd4O89016 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.62■□□□□ 0.57
Abcd4O89016 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Abcd4O89016 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcd4O89016 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Abcd4O89016 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcd4O89016 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcd4O89016 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcd4O89016 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Abcd4O89016 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.61■□□□□ 0.57
Abcd4O89016 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.61■□□□□ 0.57
Abcd4O89016 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Abcd4O89016 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcd4O89016 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcd4O89016 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcd4O89016 Gm12922-201ENSMUST00000120626 809 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms