Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Syn1O88935 Gm12251-201ENSMUST00000117893 792 ntBASIC21.59■■□□□ 1.05
Syn1O88935 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.59■■□□□ 1.05
Syn1O88935 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Syn1O88935 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Syn1O88935 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Syn1O88935 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Syn1O88935 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.58■■□□□ 1.05
Syn1O88935 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.58■■□□□ 1.05
Syn1O88935 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.58■■□□□ 1.05
Syn1O88935 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Syn1O88935 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.58■■□□□ 1.04
Syn1O88935 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Syn1O88935 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Syn1O88935 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Syn1O88935 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Syn1O88935 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Syn1O88935 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Syn1O88935 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Syn1O88935 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Syn1O88935 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Syn1O88935 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Syn1O88935 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Syn1O88935 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Syn1O88935 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Syn1O88935 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Syn1O88935 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Syn1O88935 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Syn1O88935 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Syn1O88935 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Syn1O88935 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Syn1O88935 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.53■■□□□ 1.04
Syn1O88935 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Syn1O88935 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.53■■□□□ 1.04
Syn1O88935 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Syn1O88935 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Syn1O88935 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Syn1O88935 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Syn1O88935 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Syn1O88935 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Syn1O88935 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Syn1O88935 Spcs1-204ENSMUST00000226782 949 ntBASIC21.52■■□□□ 1.04
Syn1O88935 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Syn1O88935 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.52■■□□□ 1.04
Syn1O88935 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Syn1O88935 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.52■■□□□ 1.03
Syn1O88935 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Syn1O88935 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.51■■□□□ 1.03
Syn1O88935 Gm18671-201ENSMUST00000214826 683 ntBASIC21.51■■□□□ 1.03
Syn1O88935 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Syn1O88935 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Syn1O88935 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Syn1O88935 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Syn1O88935 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syn1O88935 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syn1O88935 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.5■■□□□ 1.03
Syn1O88935 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syn1O88935 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syn1O88935 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syn1O88935 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syn1O88935 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Syn1O88935 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syn1O88935 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syn1O88935 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Syn1O88935 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.49■■□□□ 1.03
Syn1O88935 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Syn1O88935 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syn1O88935 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Syn1O88935 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Syn1O88935 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Syn1O88935 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Syn1O88935 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Syn1O88935 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Syn1O88935 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.48■■□□□ 1.03
Syn1O88935 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.47■■□□□ 1.03
Syn1O88935 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.47■■□□□ 1.03
Syn1O88935 Gm40848-201ENSMUST00000221998 324 ntBASIC21.47■■□□□ 1.03
Syn1O88935 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.47■■□□□ 1.03
Syn1O88935 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syn1O88935 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syn1O88935 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syn1O88935 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syn1O88935 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.46■■□□□ 1.03
Syn1O88935 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Syn1O88935 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.46■■□□□ 1.03
Syn1O88935 Gm10602-201ENSMUST00000098239 609 ntBASIC21.46■■□□□ 1.03
Syn1O88935 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syn1O88935 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.45■■□□□ 1.02
Syn1O88935 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.45■■□□□ 1.02
Syn1O88935 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Syn1O88935 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Syn1O88935 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms