Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tulp3O88413 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tulp3O88413 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tulp3O88413 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tulp3O88413 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tulp3O88413 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tulp3O88413 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tulp3O88413 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tulp3O88413 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.34■□□□□ 0.69
Tulp3O88413 Gm11687-201ENSMUST00000118911 886 ntBASIC19.34■□□□□ 0.69
Tulp3O88413 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tulp3O88413 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tulp3O88413 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tulp3O88413 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tulp3O88413 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tulp3O88413 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tulp3O88413 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tulp3O88413 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tulp3O88413 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tulp3O88413 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tulp3O88413 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Tulp3O88413 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tulp3O88413 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tulp3O88413 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tulp3O88413 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tulp3O88413 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.32■□□□□ 0.68
Tulp3O88413 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tulp3O88413 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tulp3O88413 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.32■□□□□ 0.68
Tulp3O88413 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.31■□□□□ 0.68
Tulp3O88413 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tulp3O88413 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tulp3O88413 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tulp3O88413 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tulp3O88413 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Tulp3O88413 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.3■□□□□ 0.68
Tulp3O88413 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tulp3O88413 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tulp3O88413 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.29■□□□□ 0.68
Tulp3O88413 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.29■□□□□ 0.68
Tulp3O88413 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tulp3O88413 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.29■□□□□ 0.68
Tulp3O88413 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tulp3O88413 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tulp3O88413 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Tulp3O88413 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tulp3O88413 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tulp3O88413 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tulp3O88413 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tulp3O88413 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tulp3O88413 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tulp3O88413 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tulp3O88413 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tulp3O88413 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Tulp3O88413 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tulp3O88413 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.27■□□□□ 0.68
Tulp3O88413 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Tulp3O88413 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Tulp3O88413 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tulp3O88413 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tulp3O88413 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tulp3O88413 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.26■□□□□ 0.67
Tulp3O88413 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tulp3O88413 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tulp3O88413 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms