Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim1O70400 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim1O70400 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim1O70400 Gm14117-201ENSMUST00000122417 843 ntBASIC20.57■□□□□ 0.88
Pdlim1O70400 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.57■□□□□ 0.88
Pdlim1O70400 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim1O70400 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.56■□□□□ 0.88
Pdlim1O70400 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim1O70400 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim1O70400 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim1O70400 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.56■□□□□ 0.88
Pdlim1O70400 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim1O70400 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.55■□□□□ 0.88
Pdlim1O70400 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pdlim1O70400 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.55■□□□□ 0.88
Pdlim1O70400 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.55■□□□□ 0.88
Pdlim1O70400 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim1O70400 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim1O70400 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim1O70400 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim1O70400 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim1O70400 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.54■□□□□ 0.88
Pdlim1O70400 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim1O70400 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim1O70400 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim1O70400 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.54■□□□□ 0.88
Pdlim1O70400 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim1O70400 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim1O70400 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pdlim1O70400 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.53■□□□□ 0.88
Pdlim1O70400 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.53■□□□□ 0.88
Pdlim1O70400 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.53■□□□□ 0.88
Pdlim1O70400 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim1O70400 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pdlim1O70400 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim1O70400 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim1O70400 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.52■□□□□ 0.88
Pdlim1O70400 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.52■□□□□ 0.88
Pdlim1O70400 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim1O70400 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim1O70400 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim1O70400 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim1O70400 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pdlim1O70400 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim1O70400 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.51■□□□□ 0.87
Pdlim1O70400 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim1O70400 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim1O70400 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.5■□□□□ 0.87
Pdlim1O70400 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim1O70400 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.5■□□□□ 0.87
Pdlim1O70400 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim1O70400 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim1O70400 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Pdlim1O70400 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.5■□□□□ 0.87
Pdlim1O70400 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pdlim1O70400 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim1O70400 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pdlim1O70400 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim1O70400 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim1O70400 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pdlim1O70400 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Pdlim1O70400 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim1O70400 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pdlim1O70400 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pdlim1O70400 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pdlim1O70400 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim1O70400 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim1O70400 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim1O70400 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Pdlim1O70400 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim1O70400 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim1O70400 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim1O70400 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim1O70400 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
Pdlim1O70400 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.47■□□□□ 0.87
Pdlim1O70400 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim1O70400 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdlim1O70400 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim1O70400 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim1O70400 Gm22238-201ENSMUST00000175222 88 ntBASIC20.46■□□□□ 0.87
Pdlim1O70400 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdlim1O70400 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
Pdlim1O70400 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms