Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna4O70174 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chrna4O70174 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
Chrna4O70174 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna4O70174 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna4O70174 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna4O70174 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.03■□□□□ 0.96
Chrna4O70174 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna4O70174 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Chrna4O70174 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna4O70174 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chrna4O70174 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna4O70174 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna4O70174 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chrna4O70174 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chrna4O70174 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chrna4O70174 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Chrna4O70174 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna4O70174 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna4O70174 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.01■□□□□ 0.95
Chrna4O70174 Gm15820-201ENSMUST00000201566 728 ntBASIC21.01■□□□□ 0.95
Chrna4O70174 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.01■□□□□ 0.95
Chrna4O70174 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.01■□□□□ 0.95
Chrna4O70174 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Chrna4O70174 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna4O70174 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Chrna4O70174 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna4O70174 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna4O70174 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chrna4O70174 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chrna4O70174 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna4O70174 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna4O70174 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chrna4O70174 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna4O70174 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna4O70174 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna4O70174 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna4O70174 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.99■□□□□ 0.95
Chrna4O70174 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Chrna4O70174 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.99■□□□□ 0.95
Chrna4O70174 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.99■□□□□ 0.95
Chrna4O70174 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna4O70174 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna4O70174 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna4O70174 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna4O70174 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Chrna4O70174 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.98■□□□□ 0.95
Chrna4O70174 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.98■□□□□ 0.95
Chrna4O70174 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna4O70174 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna4O70174 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.98■□□□□ 0.95
Chrna4O70174 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna4O70174 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.97■□□□□ 0.95
Chrna4O70174 Gm10399-202ENSMUST00000202768 748 ntBASIC20.97■□□□□ 0.95
Chrna4O70174 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna4O70174 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna4O70174 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna4O70174 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna4O70174 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna4O70174 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna4O70174 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.96■□□□□ 0.95
Chrna4O70174 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna4O70174 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chrna4O70174 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna4O70174 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna4O70174 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Chrna4O70174 Gm15546-201ENSMUST00000122095 826 ntBASIC20.95■□□□□ 0.94
Chrna4O70174 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna4O70174 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Chrna4O70174 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna4O70174 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna4O70174 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna4O70174 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna4O70174 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Chrna4O70174 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna4O70174 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna4O70174 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna4O70174 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chrna4O70174 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna4O70174 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna4O70174 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.93■□□□□ 0.94
Chrna4O70174 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chrna4O70174 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna4O70174 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna4O70174 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna4O70174 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna4O70174 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
Chrna4O70174 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna4O70174 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna4O70174 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna4O70174 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna4O70174 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.91■□□□□ 0.94
Chrna4O70174 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Chrna4O70174 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.91■□□□□ 0.94
Chrna4O70174 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna4O70174 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Chrna4O70174 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.9■□□□□ 0.94
Chrna4O70174 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms