Protein–RNA interactions for Protein: O54915

Nr1i2, Nuclear receptor subfamily 1 group I member 2, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i2O54915 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nr1i2O54915 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nr1i2O54915 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nr1i2O54915 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.32■■□□□ 1.32
Nr1i2O54915 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i2O54915 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i2O54915 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.31■■□□□ 1.32
Nr1i2O54915 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i2O54915 Gm10399-202ENSMUST00000202768 748 ntBASIC23.31■■□□□ 1.32
Nr1i2O54915 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i2O54915 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Nr1i2O54915 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nr1i2O54915 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i2O54915 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i2O54915 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.3■■□□□ 1.32
Nr1i2O54915 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i2O54915 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i2O54915 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i2O54915 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.3■■□□□ 1.32
Nr1i2O54915 Gm5812-201ENSMUST00000061073 957 ntBASIC23.3■■□□□ 1.32
Nr1i2O54915 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i2O54915 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nr1i2O54915 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nr1i2O54915 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Nr1i2O54915 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
Nr1i2O54915 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.29■■□□□ 1.32
Nr1i2O54915 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nr1i2O54915 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.29■■□□□ 1.32
Nr1i2O54915 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nr1i2O54915 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.28■■□□□ 1.32
Nr1i2O54915 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.28■■□□□ 1.32
Nr1i2O54915 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nr1i2O54915 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Nr1i2O54915 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Nr1i2O54915 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nr1i2O54915 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nr1i2O54915 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i2O54915 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i2O54915 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i2O54915 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i2O54915 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Nr1i2O54915 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i2O54915 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nr1i2O54915 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Nr1i2O54915 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Nr1i2O54915 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.26■■□□□ 1.31
Nr1i2O54915 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.26■■□□□ 1.31
Nr1i2O54915 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.26■■□□□ 1.31
Nr1i2O54915 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i2O54915 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i2O54915 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i2O54915 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i2O54915 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nr1i2O54915 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i2O54915 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.24■■□□□ 1.31
Nr1i2O54915 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.24■■□□□ 1.31
Nr1i2O54915 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i2O54915 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i2O54915 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i2O54915 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i2O54915 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nr1i2O54915 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Nr1i2O54915 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Nr1i2O54915 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Nr1i2O54915 Gm15820-201ENSMUST00000201566 728 ntBASIC23.23■■□□□ 1.31
Nr1i2O54915 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Nr1i2O54915 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nr1i2O54915 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i2O54915 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i2O54915 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i2O54915 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i2O54915 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nr1i2O54915 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Nr1i2O54915 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Nr1i2O54915 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nr1i2O54915 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nr1i2O54915 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nr1i2O54915 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.31
Nr1i2O54915 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i2O54915 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.2■■□□□ 1.3
Nr1i2O54915 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Nr1i2O54915 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i2O54915 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i2O54915 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nr1i2O54915 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nr1i2O54915 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Nr1i2O54915 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.19■■□□□ 1.3
Nr1i2O54915 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nr1i2O54915 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nr1i2O54915 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nr1i2O54915 Gm15546-201ENSMUST00000122095 826 ntBASIC23.19■■□□□ 1.3
Nr1i2O54915 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Nr1i2O54915 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nr1i2O54915 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i2O54915 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i2O54915 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i2O54915 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nr1i2O54915 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.17■■□□□ 1.3
Nr1i2O54915 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.17■■□□□ 1.3
Nr1i2O54915 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms