Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brs3O54798 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brs3O54798 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Brs3O54798 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Brs3O54798 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Brs3O54798 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brs3O54798 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Brs3O54798 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.05■□□□□ 0.32
Brs3O54798 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Brs3O54798 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brs3O54798 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brs3O54798 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Brs3O54798 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.05■□□□□ 0.32
Brs3O54798 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Brs3O54798 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Brs3O54798 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Brs3O54798 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Brs3O54798 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Brs3O54798 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Brs3O54798 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Brs3O54798 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Brs3O54798 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.04■□□□□ 0.32
Brs3O54798 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brs3O54798 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brs3O54798 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brs3O54798 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brs3O54798 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Brs3O54798 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.04■□□□□ 0.32
Brs3O54798 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Brs3O54798 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
Brs3O54798 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Brs3O54798 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Brs3O54798 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Brs3O54798 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Brs3O54798 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.02■□□□□ 0.32
Brs3O54798 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Brs3O54798 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Brs3O54798 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Brs3O54798 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.02■□□□□ 0.32
Brs3O54798 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Brs3O54798 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brs3O54798 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brs3O54798 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brs3O54798 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brs3O54798 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brs3O54798 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.01■□□□□ 0.31
Brs3O54798 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Brs3O54798 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brs3O54798 Gm22238-201ENSMUST00000175222 88 ntBASIC17.01■□□□□ 0.31
Brs3O54798 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Brs3O54798 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brs3O54798 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brs3O54798 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brs3O54798 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Brs3O54798 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brs3O54798 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brs3O54798 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Brs3O54798 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Brs3O54798 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brs3O54798 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17■□□□□ 0.31
Brs3O54798 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Brs3O54798 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Brs3O54798 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brs3O54798 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Brs3O54798 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brs3O54798 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brs3O54798 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Brs3O54798 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brs3O54798 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brs3O54798 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.98■□□□□ 0.31
Brs3O54798 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brs3O54798 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.98■□□□□ 0.31
Brs3O54798 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brs3O54798 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.98■□□□□ 0.31
Brs3O54798 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brs3O54798 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brs3O54798 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brs3O54798 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brs3O54798 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brs3O54798 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Brs3O54798 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.97■□□□□ 0.31
Brs3O54798 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brs3O54798 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brs3O54798 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brs3O54798 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Brs3O54798 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Brs3O54798 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.96■□□□□ 0.31
Brs3O54798 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brs3O54798 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brs3O54798 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brs3O54798 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Brs3O54798 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brs3O54798 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms