Protein–RNA interactions for Protein: O54774

Ap3d1, AP-3 complex subunit delta-1, mousemouse

Predictions only

Length 1,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3d1O54774 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ap3d1O54774 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap3d1O54774 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap3d1O54774 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ap3d1O54774 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ap3d1O54774 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.23■□□□□ 0.99
Ap3d1O54774 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ap3d1O54774 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ap3d1O54774 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.22■□□□□ 0.99
Ap3d1O54774 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ap3d1O54774 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ap3d1O54774 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ap3d1O54774 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ap3d1O54774 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Ap3d1O54774 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Ap3d1O54774 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ap3d1O54774 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ap3d1O54774 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.21■□□□□ 0.99
Ap3d1O54774 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.21■□□□□ 0.99
Ap3d1O54774 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ap3d1O54774 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ap3d1O54774 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ap3d1O54774 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ap3d1O54774 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ap3d1O54774 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Ap3d1O54774 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ap3d1O54774 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ap3d1O54774 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ap3d1O54774 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ap3d1O54774 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ap3d1O54774 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ap3d1O54774 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ap3d1O54774 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ap3d1O54774 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ap3d1O54774 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ap3d1O54774 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.18■□□□□ 0.98
Ap3d1O54774 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.18■□□□□ 0.98
Ap3d1O54774 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ap3d1O54774 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ap3d1O54774 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Ap3d1O54774 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ap3d1O54774 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ap3d1O54774 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ap3d1O54774 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ap3d1O54774 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ap3d1O54774 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ap3d1O54774 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.16■□□□□ 0.98
Ap3d1O54774 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ap3d1O54774 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ap3d1O54774 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ap3d1O54774 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ap3d1O54774 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.15■□□□□ 0.98
Ap3d1O54774 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.15■□□□□ 0.98
Ap3d1O54774 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ap3d1O54774 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ap3d1O54774 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.14■□□□□ 0.97
Ap3d1O54774 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ap3d1O54774 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.14■□□□□ 0.97
Ap3d1O54774 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ap3d1O54774 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ap3d1O54774 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ap3d1O54774 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ap3d1O54774 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap3d1O54774 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.13■□□□□ 0.97
Ap3d1O54774 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap3d1O54774 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap3d1O54774 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap3d1O54774 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ap3d1O54774 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ap3d1O54774 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ap3d1O54774 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ap3d1O54774 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.12■□□□□ 0.97
Ap3d1O54774 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Ap3d1O54774 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ap3d1O54774 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ap3d1O54774 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ap3d1O54774 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ap3d1O54774 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ap3d1O54774 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms