Protein–RNA interactions for Protein: O35739

Klf9, Krueppel-like factor 9, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf9O35739 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Klf9O35739 Mir3960-201ENSMUST00000198213 73 ntBASIC17.54■□□□□ 0.4
Klf9O35739 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Klf9O35739 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.54■□□□□ 0.4
Klf9O35739 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Klf9O35739 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Klf9O35739 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Klf9O35739 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Klf9O35739 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Klf9O35739 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.53■□□□□ 0.4
Klf9O35739 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.53■□□□□ 0.4
Klf9O35739 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.53■□□□□ 0.4
Klf9O35739 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Klf9O35739 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.52■□□□□ 0.4
Klf9O35739 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Klf9O35739 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Klf9O35739 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.52■□□□□ 0.4
Klf9O35739 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.52■□□□□ 0.4
Klf9O35739 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Klf9O35739 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Klf9O35739 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Klf9O35739 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Klf9O35739 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Klf9O35739 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Klf9O35739 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Klf9O35739 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Klf9O35739 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.51■□□□□ 0.39
Klf9O35739 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Klf9O35739 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Klf9O35739 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Klf9O35739 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Klf9O35739 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.5■□□□□ 0.39
Klf9O35739 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Klf9O35739 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Klf9O35739 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Klf9O35739 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Klf9O35739 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Klf9O35739 Terc-201ENSMUST00000082862 423 ntBASIC17.5■□□□□ 0.39
Klf9O35739 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Klf9O35739 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.5■□□□□ 0.39
Klf9O35739 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Klf9O35739 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Klf9O35739 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.49■□□□□ 0.39
Klf9O35739 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Klf9O35739 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Klf9O35739 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Klf9O35739 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Klf9O35739 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.48■□□□□ 0.39
Klf9O35739 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Klf9O35739 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Klf9O35739 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Klf9O35739 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Klf9O35739 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Klf9O35739 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.47■□□□□ 0.39
Klf9O35739 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Klf9O35739 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.47■□□□□ 0.39
Klf9O35739 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Klf9O35739 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Klf9O35739 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Klf9O35739 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Klf9O35739 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Klf9O35739 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Klf9O35739 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Klf9O35739 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Klf9O35739 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Klf9O35739 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Klf9O35739 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Klf9O35739 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Klf9O35739 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Klf9O35739 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Klf9O35739 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms