Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk4O35493 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clk4O35493 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk4O35493 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.85■□□□□ 0.77
Clk4O35493 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
Clk4O35493 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk4O35493 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.85■□□□□ 0.77
Clk4O35493 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clk4O35493 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk4O35493 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clk4O35493 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clk4O35493 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk4O35493 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.84■□□□□ 0.77
Clk4O35493 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.84■□□□□ 0.77
Clk4O35493 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.84■□□□□ 0.77
Clk4O35493 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk4O35493 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk4O35493 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk4O35493 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clk4O35493 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk4O35493 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk4O35493 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk4O35493 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.83■□□□□ 0.77
Clk4O35493 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.83■□□□□ 0.77
Clk4O35493 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk4O35493 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk4O35493 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk4O35493 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.83■□□□□ 0.77
Clk4O35493 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clk4O35493 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Clk4O35493 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Clk4O35493 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clk4O35493 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.82■□□□□ 0.76
Clk4O35493 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.82■□□□□ 0.76
Clk4O35493 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clk4O35493 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.82■□□□□ 0.76
Clk4O35493 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Clk4O35493 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clk4O35493 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Clk4O35493 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.81■□□□□ 0.76
Clk4O35493 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.81■□□□□ 0.76
Clk4O35493 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.81■□□□□ 0.76
Clk4O35493 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.81■□□□□ 0.76
Clk4O35493 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clk4O35493 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk4O35493 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk4O35493 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clk4O35493 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk4O35493 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk4O35493 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clk4O35493 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk4O35493 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.79■□□□□ 0.76
Clk4O35493 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk4O35493 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk4O35493 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Clk4O35493 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk4O35493 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk4O35493 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.79■□□□□ 0.76
Clk4O35493 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.78■□□□□ 0.76
Clk4O35493 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.78■□□□□ 0.76
Clk4O35493 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Clk4O35493 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk4O35493 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Clk4O35493 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk4O35493 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk4O35493 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk4O35493 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clk4O35493 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.77■□□□□ 0.75
Clk4O35493 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Clk4O35493 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clk4O35493 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk4O35493 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.76■□□□□ 0.75
Clk4O35493 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.76■□□□□ 0.75
Clk4O35493 Gm40881-201ENSMUST00000223397 166 ntBASIC19.76■□□□□ 0.75
Clk4O35493 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk4O35493 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk4O35493 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clk4O35493 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms