Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Capn1O35350 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.13■□□□□ 0.65
Capn1O35350 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Capn1O35350 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Capn1O35350 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Capn1O35350 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Capn1O35350 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Capn1O35350 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Capn1O35350 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.12■□□□□ 0.65
Capn1O35350 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 Gm9847-201ENSMUST00000052528 599 ntBASIC19.12■□□□□ 0.65
Capn1O35350 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Capn1O35350 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Capn1O35350 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Capn1O35350 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Capn1O35350 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.11■□□□□ 0.65
Capn1O35350 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.11■□□□□ 0.65
Capn1O35350 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Capn1O35350 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Capn1O35350 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Capn1O35350 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Gm21956-201ENSMUST00000179946 522 ntBASIC19.1■□□□□ 0.65
Capn1O35350 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Capn1O35350 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Capn1O35350 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.09■□□□□ 0.65
Capn1O35350 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.09■□□□□ 0.65
Capn1O35350 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capn1O35350 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capn1O35350 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capn1O35350 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capn1O35350 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Capn1O35350 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.09■□□□□ 0.65
Capn1O35350 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capn1O35350 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Capn1O35350 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Capn1O35350 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Capn1O35350 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Capn1O35350 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Capn1O35350 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Capn1O35350 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Capn1O35350 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Capn1O35350 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.07■□□□□ 0.64
Capn1O35350 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Capn1O35350 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Capn1O35350 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Capn1O35350 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Capn1O35350 Gm12922-201ENSMUST00000120626 809 ntBASIC19.06■□□□□ 0.64
Capn1O35350 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Capn1O35350 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Capn1O35350 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Capn1O35350 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Capn1O35350 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Capn1O35350 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Capn1O35350 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Capn1O35350 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Capn1O35350 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.03■□□□□ 0.64
Capn1O35350 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Capn1O35350 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.03■□□□□ 0.64
Capn1O35350 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Capn1O35350 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.03■□□□□ 0.64
Capn1O35350 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Capn1O35350 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Capn1O35350 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capn1O35350 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capn1O35350 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capn1O35350 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
Capn1O35350 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capn1O35350 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.02■□□□□ 0.64
Capn1O35350 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Capn1O35350 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Capn1O35350 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Capn1O35350 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capn1O35350 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms