Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.13■□□□□ 0.97
Trove2O08848 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Gm14523-201ENSMUST00000117260 558 ntBASIC21.13■□□□□ 0.97
Trove2O08848 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trove2O08848 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trove2O08848 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Trove2O08848 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trove2O08848 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trove2O08848 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.12■□□□□ 0.97
Trove2O08848 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trove2O08848 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trove2O08848 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trove2O08848 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trove2O08848 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.11■□□□□ 0.97
Trove2O08848 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trove2O08848 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trove2O08848 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trove2O08848 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trove2O08848 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trove2O08848 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trove2O08848 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trove2O08848 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.1■□□□□ 0.97
Trove2O08848 Gm7332-201ENSMUST00000118351 454 ntBASIC21.1■□□□□ 0.97
Trove2O08848 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.1■□□□□ 0.97
Trove2O08848 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trove2O08848 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.09■□□□□ 0.97
Trove2O08848 Iqck-206ENSMUST00000208658 2891 ntBASIC21.09■□□□□ 0.97
Trove2O08848 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.09■□□□□ 0.97
Trove2O08848 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trove2O08848 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trove2O08848 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trove2O08848 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trove2O08848 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trove2O08848 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trove2O08848 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.08■□□□□ 0.97
Trove2O08848 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trove2O08848 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trove2O08848 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trove2O08848 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trove2O08848 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.07■□□□□ 0.96
Trove2O08848 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.07■□□□□ 0.96
Trove2O08848 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trove2O08848 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trove2O08848 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trove2O08848 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trove2O08848 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trove2O08848 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
Trove2O08848 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trove2O08848 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trove2O08848 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trove2O08848 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.06■□□□□ 0.96
Trove2O08848 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trove2O08848 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trove2O08848 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trove2O08848 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trove2O08848 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trove2O08848 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trove2O08848 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.05■□□□□ 0.96
Trove2O08848 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Trove2O08848 Gm12366-201ENSMUST00000121722 873 ntBASIC21.05■□□□□ 0.96
Trove2O08848 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.05■□□□□ 0.96
Trove2O08848 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trove2O08848 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.05■□□□□ 0.96
Trove2O08848 Gm5786-201ENSMUST00000085368 882 ntBASIC21.05■□□□□ 0.96
Trove2O08848 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trove2O08848 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.05■□□□□ 0.96
Trove2O08848 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trove2O08848 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trove2O08848 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trove2O08848 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trove2O08848 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.04■□□□□ 0.96
Trove2O08848 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trove2O08848 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trove2O08848 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trove2O08848 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Trove2O08848 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trove2O08848 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trove2O08848 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.03■□□□□ 0.96
Trove2O08848 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trove2O08848 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trove2O08848 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trove2O08848 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms