Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr2jO08740 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Polr2jO08740 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Polr2jO08740 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr2jO08740 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Polr2jO08740 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr2jO08740 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr2jO08740 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr2jO08740 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Polr2jO08740 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.91■□□□□ 0.78
Polr2jO08740 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Polr2jO08740 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Polr2jO08740 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.91■□□□□ 0.78
Polr2jO08740 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.91■□□□□ 0.78
Polr2jO08740 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr2jO08740 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr2jO08740 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr2jO08740 Gm14523-201ENSMUST00000117260 558 ntBASIC19.9■□□□□ 0.78
Polr2jO08740 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr2jO08740 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.9■□□□□ 0.78
Polr2jO08740 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr2jO08740 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Polr2jO08740 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Polr2jO08740 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Polr2jO08740 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr2jO08740 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Polr2jO08740 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr2jO08740 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr2jO08740 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr2jO08740 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr2jO08740 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr2jO08740 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Polr2jO08740 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr2jO08740 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Polr2jO08740 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr2jO08740 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Polr2jO08740 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr2jO08740 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr2jO08740 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Polr2jO08740 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr2jO08740 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Polr2jO08740 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.86■□□□□ 0.77
Polr2jO08740 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr2jO08740 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr2jO08740 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr2jO08740 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr2jO08740 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr2jO08740 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr2jO08740 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr2jO08740 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr2jO08740 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr2jO08740 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Polr2jO08740 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr2jO08740 Gm7332-201ENSMUST00000118351 454 ntBASIC19.84■□□□□ 0.77
Polr2jO08740 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.84■□□□□ 0.77
Polr2jO08740 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.84■□□□□ 0.77
Polr2jO08740 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Polr2jO08740 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Polr2jO08740 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Polr2jO08740 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Polr2jO08740 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr2jO08740 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr2jO08740 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr2jO08740 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr2jO08740 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.83■□□□□ 0.77
Polr2jO08740 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr2jO08740 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr2jO08740 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr2jO08740 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr2jO08740 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr2jO08740 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr2jO08740 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr2jO08740 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr2jO08740 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr2jO08740 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.82■□□□□ 0.76
Polr2jO08740 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.82■□□□□ 0.76
Polr2jO08740 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Polr2jO08740 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr2jO08740 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr2jO08740 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Polr2jO08740 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr2jO08740 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.81■□□□□ 0.76
Polr2jO08740 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Polr2jO08740 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr2jO08740 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Polr2jO08740 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr2jO08740 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Polr2jO08740 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Polr2jO08740 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.81■□□□□ 0.76
Polr2jO08740 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr2jO08740 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr2jO08740 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr2jO08740 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms