Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tnfrsf11bO08712 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Cap2-205ENSMUST00000225824 1634 ntBASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tnfrsf11bO08712 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf11bO08712 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf11bO08712 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.08■□□□□ 0.97
Tnfrsf11bO08712 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Tnfrsf11bO08712 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf11bO08712 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf11bO08712 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf11bO08712 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tnfrsf11bO08712 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfrsf11bO08712 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf11bO08712 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfrsf11bO08712 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfrsf11bO08712 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11bO08712 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.03■□□□□ 0.96
Tnfrsf11bO08712 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11bO08712 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11bO08712 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11bO08712 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Tnfrsf11bO08712 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfrsf11bO08712 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms