Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raet1cO08604 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
Raet1cO08604 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Raet1cO08604 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.56■□□□□ 0.56
Raet1cO08604 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Raet1cO08604 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.55■□□□□ 0.56
Raet1cO08604 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Raet1cO08604 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Raet1cO08604 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1cO08604 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1cO08604 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1cO08604 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Raet1cO08604 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Raet1cO08604 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1cO08604 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Raet1cO08604 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1cO08604 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1cO08604 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Raet1cO08604 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.53■□□□□ 0.56
Raet1cO08604 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1cO08604 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.53■□□□□ 0.56
Raet1cO08604 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1cO08604 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1cO08604 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Raet1cO08604 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Raet1cO08604 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Raet1cO08604 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Raet1cO08604 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Raet1cO08604 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Raet1cO08604 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.52■□□□□ 0.55
Raet1cO08604 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Raet1cO08604 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1cO08604 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.5■□□□□ 0.55
Raet1cO08604 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1cO08604 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1cO08604 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Raet1cO08604 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1cO08604 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1cO08604 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1cO08604 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Raet1cO08604 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1cO08604 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Raet1cO08604 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1cO08604 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1cO08604 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1cO08604 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Raet1cO08604 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Raet1cO08604 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1cO08604 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Raet1cO08604 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.47■□□□□ 0.55
Raet1cO08604 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1cO08604 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.47■□□□□ 0.55
Raet1cO08604 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1cO08604 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1cO08604 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1cO08604 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.47■□□□□ 0.55
Raet1cO08604 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.47■□□□□ 0.55
Raet1cO08604 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1cO08604 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1cO08604 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1cO08604 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Raet1cO08604 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1cO08604 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1cO08604 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1cO08604 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Raet1cO08604 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1cO08604 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1cO08604 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1cO08604 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1cO08604 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1cO08604 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1cO08604 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Raet1cO08604 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.45■□□□□ 0.54
Raet1cO08604 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1cO08604 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Raet1cO08604 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.45■□□□□ 0.54
Raet1cO08604 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms