Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3139J3QK78 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.8■□□□□ 0.92
Gm3139J3QK78 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.8■□□□□ 0.92
Gm3139J3QK78 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3139J3QK78 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3139J3QK78 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3139J3QK78 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.79■□□□□ 0.92
Gm3139J3QK78 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.79■□□□□ 0.92
Gm3139J3QK78 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3139J3QK78 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3139J3QK78 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3139J3QK78 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm3139J3QK78 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3139J3QK78 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm3139J3QK78 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3139J3QK78 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3139J3QK78 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3139J3QK78 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3139J3QK78 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.77■□□□□ 0.92
Gm3139J3QK78 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm3139J3QK78 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm3139J3QK78 Gm12922-201ENSMUST00000120626 809 ntBASIC20.76■□□□□ 0.91
Gm3139J3QK78 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3139J3QK78 Gm9847-201ENSMUST00000052528 599 ntBASIC20.76■□□□□ 0.91
Gm3139J3QK78 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3139J3QK78 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.76■□□□□ 0.91
Gm3139J3QK78 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm3139J3QK78 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gm3139J3QK78 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm3139J3QK78 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3139J3QK78 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm3139J3QK78 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.75■□□□□ 0.91
Gm3139J3QK78 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3139J3QK78 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm3139J3QK78 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3139J3QK78 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3139J3QK78 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3139J3QK78 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3139J3QK78 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3139J3QK78 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3139J3QK78 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3139J3QK78 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gm3139J3QK78 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3139J3QK78 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3139J3QK78 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3139J3QK78 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3139J3QK78 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Gm3139J3QK78 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3139J3QK78 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3139J3QK78 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Gm3139J3QK78 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3139J3QK78 Gm9870-201ENSMUST00000063874 645 ntBASIC20.72■□□□□ 0.91
Gm3139J3QK78 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
Gm3139J3QK78 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Gm3139J3QK78 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3139J3QK78 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3139J3QK78 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3139J3QK78 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3139J3QK78 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Gm13241-201ENSMUST00000094493 780 ntBASIC20.71■□□□□ 0.91
Gm3139J3QK78 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3139J3QK78 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3139J3QK78 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3139J3QK78 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3139J3QK78 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3139J3QK78 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3139J3QK78 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3139J3QK78 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3139J3QK78 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm3139J3QK78 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3139J3QK78 Gm7143-201ENSMUST00000222811 859 ntBASIC20.68■□□□□ 0.9
Gm3139J3QK78 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3139J3QK78 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm3139J3QK78 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm3139J3QK78 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm3139J3QK78 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3139J3QK78 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3139J3QK78 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3139J3QK78 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3139J3QK78 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.67■□□□□ 0.9
Gm3139J3QK78 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm3139J3QK78 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3139J3QK78 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
Gm3139J3QK78 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms