Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm21818J3KMS6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21818J3KMS6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Gm14523-201ENSMUST00000117260 558 ntBASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21818J3KMS6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21818J3KMS6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm21818J3KMS6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21818J3KMS6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21818J3KMS6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21818J3KMS6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21818J3KMS6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21818J3KMS6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Gm7332-201ENSMUST00000118351 454 ntBASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Gm21818J3KMS6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21818J3KMS6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.62■□□□□ 0.41
Gm21818J3KMS6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21818J3KMS6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21818J3KMS6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21818J3KMS6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.61■□□□□ 0.41
Gm21818J3KMS6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21818J3KMS6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm21818J3KMS6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.61■□□□□ 0.41
Gm21818J3KMS6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.6■□□□□ 0.41
Gm21818J3KMS6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21818J3KMS6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm21818J3KMS6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms