Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm10542F6XDR3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Gm9806-201ENSMUST00000051080 552 ntBASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm10542F6XDR3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10542F6XDR3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10542F6XDR3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.36□□□□□ -0.11
Gm10542F6XDR3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10542F6XDR3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm10542F6XDR3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Gm10542F6XDR3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm10542F6XDR3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm10542F6XDR3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm10542F6XDR3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm10542F6XDR3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm10542F6XDR3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm10542F6XDR3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10542F6XDR3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.31□□□□□ -0.12
Gm10542F6XDR3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10542F6XDR3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm10542F6XDR3 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.31□□□□□ -0.12
Gm10542F6XDR3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm10542F6XDR3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm10542F6XDR3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gm10542F6XDR3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm10542F6XDR3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm10542F6XDR3 Gm11687-201ENSMUST00000118911 886 ntBASIC14.3□□□□□ -0.12
Gm10542F6XDR3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm10542F6XDR3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms