Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc188F6WEU2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc188F6WEU2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc188F6WEU2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc188F6WEU2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.61■■□□□ 1.05
Ccdc188F6WEU2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.61■■□□□ 1.05
Ccdc188F6WEU2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc188F6WEU2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc188F6WEU2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc188F6WEU2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc188F6WEU2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.6■■□□□ 1.05
Ccdc188F6WEU2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.6■■□□□ 1.05
Ccdc188F6WEU2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc188F6WEU2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc188F6WEU2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc188F6WEU2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 Gm7143-201ENSMUST00000222811 859 ntBASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ccdc188F6WEU2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Gm12441-201ENSMUST00000121806 588 ntBASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ccdc188F6WEU2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Ccdc188F6WEU2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc188F6WEU2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccdc188F6WEU2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc188F6WEU2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc188F6WEU2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc188F6WEU2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc188F6WEU2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc188F6WEU2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc188F6WEU2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc188F6WEU2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ccdc188F6WEU2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc188F6WEU2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.55■■□□□ 1.04
Ccdc188F6WEU2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc188F6WEU2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.54■■□□□ 1.04
Ccdc188F6WEU2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc188F6WEU2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc188F6WEU2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Ccdc188F6WEU2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc188F6WEU2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc188F6WEU2 Smad6-203ENSMUST00000179458 273 ntBASIC21.52■■□□□ 1.04
Ccdc188F6WEU2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ccdc188F6WEU2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.52■■□□□ 1.04
Ccdc188F6WEU2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc188F6WEU2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Ccdc188F6WEU2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc188F6WEU2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
Ccdc188F6WEU2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc188F6WEU2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc188F6WEU2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc188F6WEU2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ccdc188F6WEU2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.5■■□□□ 1.03
Ccdc188F6WEU2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.5■■□□□ 1.03
Ccdc188F6WEU2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ccdc188F6WEU2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc188F6WEU2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.5■■□□□ 1.03
Ccdc188F6WEU2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc188F6WEU2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc188F6WEU2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc188F6WEU2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc188F6WEU2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.49■■□□□ 1.03
Ccdc188F6WEU2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc188F6WEU2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc188F6WEU2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc188F6WEU2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc188F6WEU2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Ccdc188F6WEU2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc188F6WEU2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.48■■□□□ 1.03
Ccdc188F6WEU2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms