Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gm10477F6SW83 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm10477F6SW83 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm10477F6SW83 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gm10477F6SW83 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.27■□□□□ 0.67
Gm10477F6SW83 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Gm10477F6SW83 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Gm10477F6SW83 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm10477F6SW83 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm10477F6SW83 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.26■□□□□ 0.67
Gm10477F6SW83 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm10477F6SW83 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm10477F6SW83 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm10477F6SW83 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gm10477F6SW83 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10477F6SW83 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.24■□□□□ 0.67
Gm10477F6SW83 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm10477F6SW83 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm10477F6SW83 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.24■□□□□ 0.67
Gm10477F6SW83 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.24■□□□□ 0.67
Gm10477F6SW83 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm10477F6SW83 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm10477F6SW83 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm10477F6SW83 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm10477F6SW83 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm10477F6SW83 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm10477F6SW83 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm10477F6SW83 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gm10477F6SW83 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm10477F6SW83 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm10477F6SW83 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.22■□□□□ 0.67
Gm10477F6SW83 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.22■□□□□ 0.67
Gm10477F6SW83 Gm9812-201ENSMUST00000061934 968 ntBASIC19.22■□□□□ 0.67
Gm10477F6SW83 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm10477F6SW83 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.21■□□□□ 0.67
Gm10477F6SW83 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10477F6SW83 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10477F6SW83 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm10477F6SW83 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10477F6SW83 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm10477F6SW83 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Gm10477F6SW83 Gm45855-201ENSMUST00000212546 880 ntBASIC19.18■□□□□ 0.66
Gm10477F6SW83 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms