Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc71lE9Q4T4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc71lE9Q4T4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccdc71lE9Q4T4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc71lE9Q4T4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc71lE9Q4T4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc71lE9Q4T4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc71lE9Q4T4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc71lE9Q4T4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc71lE9Q4T4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc71lE9Q4T4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc71lE9Q4T4 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.27■□□□□ 0.2
Ccdc71lE9Q4T4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc71lE9Q4T4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc71lE9Q4T4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc71lE9Q4T4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Ccdc71lE9Q4T4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc71lE9Q4T4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc71lE9Q4T4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc71lE9Q4T4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc71lE9Q4T4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc71lE9Q4T4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc71lE9Q4T4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc71lE9Q4T4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc71lE9Q4T4 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.23■□□□□ 0.19
Ccdc71lE9Q4T4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ccdc71lE9Q4T4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.23■□□□□ 0.19
Ccdc71lE9Q4T4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms