Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28043E0CXC2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Gm28043E0CXC2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28043E0CXC2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm28043E0CXC2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm28043E0CXC2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28043E0CXC2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Gm28043E0CXC2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28043E0CXC2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28043E0CXC2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28043E0CXC2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28043E0CXC2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28043E0CXC2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm28043E0CXC2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28043E0CXC2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28043E0CXC2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28043E0CXC2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gm28043E0CXC2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28043E0CXC2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28043E0CXC2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm28043E0CXC2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm28043E0CXC2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm28043E0CXC2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.58■□□□□ 0.89
Gm28043E0CXC2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm28043E0CXC2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.58■□□□□ 0.88
Gm28043E0CXC2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28043E0CXC2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28043E0CXC2 Gm5921-201ENSMUST00000075898 882 ntBASIC20.57■□□□□ 0.88
Gm28043E0CXC2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28043E0CXC2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms