Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank1D3YZU1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank1D3YZU1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank1D3YZU1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank1D3YZU1 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.68■□□□□ 0.58
Shank1D3YZU1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shank1D3YZU1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank1D3YZU1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank1D3YZU1 Gm37179-201ENSMUST00000194862 823 ntBASIC18.65■□□□□ 0.58
Shank1D3YZU1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank1D3YZU1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank1D3YZU1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank1D3YZU1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank1D3YZU1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shank1D3YZU1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shank1D3YZU1 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.64■□□□□ 0.57
Shank1D3YZU1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank1D3YZU1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank1D3YZU1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Shank1D3YZU1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank1D3YZU1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank1D3YZU1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank1D3YZU1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shank1D3YZU1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank1D3YZU1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.63■□□□□ 0.57
Shank1D3YZU1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank1D3YZU1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank1D3YZU1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shank1D3YZU1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank1D3YZU1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank1D3YZU1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.62■□□□□ 0.57
Shank1D3YZU1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Shank1D3YZU1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.62■□□□□ 0.57
Shank1D3YZU1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Shank1D3YZU1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Shank1D3YZU1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shank1D3YZU1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shank1D3YZU1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shank1D3YZU1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Shank1D3YZU1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shank1D3YZU1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shank1D3YZU1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shank1D3YZU1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shank1D3YZU1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Shank1D3YZU1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.59■□□□□ 0.57
Shank1D3YZU1 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.59■□□□□ 0.57
Shank1D3YZU1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.59■□□□□ 0.57
Shank1D3YZU1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shank1D3YZU1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Shank1D3YZU1 Gm26833-201ENSMUST00000180899 440 ntBASIC18.58■□□□□ 0.57
Shank1D3YZU1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Shank1D3YZU1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shank1D3YZU1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms