Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp27D3YV89 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp27D3YV89 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Mmp27D3YV89 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp27D3YV89 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp27D3YV89 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp27D3YV89 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp27D3YV89 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mmp27D3YV89 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp27D3YV89 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp27D3YV89 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp27D3YV89 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp27D3YV89 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp27D3YV89 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Mmp27D3YV89 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.38■□□□□ 0.37
Mmp27D3YV89 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp27D3YV89 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp27D3YV89 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp27D3YV89 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp27D3YV89 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp27D3YV89 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Mmp27D3YV89 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp27D3YV89 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp27D3YV89 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp27D3YV89 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp27D3YV89 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp27D3YV89 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Mmp27D3YV89 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp27D3YV89 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp27D3YV89 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp27D3YV89 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.32■□□□□ 0.36
Mmp27D3YV89 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms