Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm4950D3YUM8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.74■□□□□ 0.43
Gm4950D3YUM8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm4950D3YUM8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm4950D3YUM8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm4950D3YUM8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm4950D3YUM8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Gm4950D3YUM8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm4950D3YUM8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.72■□□□□ 0.43
Gm4950D3YUM8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm4950D3YUM8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm4950D3YUM8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm4950D3YUM8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm4950D3YUM8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm4950D3YUM8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm4950D3YUM8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm4950D3YUM8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm4950D3YUM8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm4950D3YUM8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm4950D3YUM8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm4950D3YUM8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm4950D3YUM8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm4950D3YUM8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm4950D3YUM8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm4950D3YUM8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Gm4950D3YUM8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms