Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hist1h2acC0HKE2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hist1h2acC0HKE2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Hist1h2acC0HKE2 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.94■□□□□ 0.62
Hist1h2acC0HKE2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Hist1h2acC0HKE2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h2acC0HKE2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h2acC0HKE2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h2acC0HKE2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h2acC0HKE2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h2acC0HKE2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2acC0HKE2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.91■□□□□ 0.62
Hist1h2acC0HKE2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2acC0HKE2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hist1h2acC0HKE2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2acC0HKE2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2acC0HKE2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h2acC0HKE2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h2acC0HKE2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h2acC0HKE2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms