Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.11
Col4a6B1AVK5 Gm8493-201ENSMUST00000196881 489 ntBASIC21.95■■□□□ 1.1
Col4a6B1AVK5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Col4a6B1AVK5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Col4a6B1AVK5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Col4a6B1AVK5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.95■■□□□ 1.1
Col4a6B1AVK5 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.95■■□□□ 1.1
Col4a6B1AVK5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Col4a6B1AVK5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a6B1AVK5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a6B1AVK5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.94■■□□□ 1.1
Col4a6B1AVK5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.94■■□□□ 1.1
Col4a6B1AVK5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col4a6B1AVK5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col4a6B1AVK5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Col4a6B1AVK5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a6B1AVK5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.92■■□□□ 1.1
Col4a6B1AVK5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Col4a6B1AVK5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Col4a6B1AVK5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.91■■□□□ 1.1
Col4a6B1AVK5 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.91■■□□□ 1.1
Col4a6B1AVK5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a6B1AVK5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a6B1AVK5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a6B1AVK5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col4a6B1AVK5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Spcs1-204ENSMUST00000226782 949 ntBASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Col4a6B1AVK5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col4a6B1AVK5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.89■■□□□ 1.1
Col4a6B1AVK5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Col4a6B1AVK5 Gm5874-201ENSMUST00000096101 508 ntBASIC21.89■■□□□ 1.1
Col4a6B1AVK5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col4a6B1AVK5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col4a6B1AVK5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col4a6B1AVK5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col4a6B1AVK5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col4a6B1AVK5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Col4a6B1AVK5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a6B1AVK5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a6B1AVK5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a6B1AVK5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a6B1AVK5 Gm43530-201ENSMUST00000195920 274 ntBASIC21.87■■□□□ 1.09
Col4a6B1AVK5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.87■■□□□ 1.09
Col4a6B1AVK5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a6B1AVK5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a6B1AVK5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a6B1AVK5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a6B1AVK5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a6B1AVK5 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.85■■□□□ 1.09
Col4a6B1AVK5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Col4a6B1AVK5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a6B1AVK5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.85■■□□□ 1.09
Col4a6B1AVK5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a6B1AVK5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a6B1AVK5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a6B1AVK5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a6B1AVK5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.83■■□□□ 1.09
Col4a6B1AVK5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a6B1AVK5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a6B1AVK5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms