Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssxa1B1AUS7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ssxa1B1AUS7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssxa1B1AUS7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssxa1B1AUS7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ssxa1B1AUS7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssxa1B1AUS7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ssxa1B1AUS7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Ssxa1B1AUS7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.83■□□□□ 0.76
Ssxa1B1AUS7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssxa1B1AUS7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.82■□□□□ 0.76
Ssxa1B1AUS7 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.82■□□□□ 0.76
Ssxa1B1AUS7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssxa1B1AUS7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssxa1B1AUS7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssxa1B1AUS7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ssxa1B1AUS7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssxa1B1AUS7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssxa1B1AUS7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Etf1-202ENSMUST00000180351 108 ntBASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssxa1B1AUS7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssxa1B1AUS7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssxa1B1AUS7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssxa1B1AUS7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssxa1B1AUS7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssxa1B1AUS7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssxa1B1AUS7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.76■□□□□ 0.75
Ssxa1B1AUS7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.76■□□□□ 0.75
Ssxa1B1AUS7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssxa1B1AUS7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms