Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.49■□□□□ 0.87
Gm28729A0A1B0GSW2 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.49■□□□□ 0.87
Gm28729A0A1B0GSW2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28729A0A1B0GSW2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28729A0A1B0GSW2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28729A0A1B0GSW2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.48■□□□□ 0.87
Gm28729A0A1B0GSW2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28729A0A1B0GSW2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28729A0A1B0GSW2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28729A0A1B0GSW2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28729A0A1B0GSW2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28729A0A1B0GSW2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28729A0A1B0GSW2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.47■□□□□ 0.87
Gm28729A0A1B0GSW2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Gm28729A0A1B0GSW2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28729A0A1B0GSW2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gm28729A0A1B0GSW2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.45■□□□□ 0.86
Gm28729A0A1B0GSW2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28729A0A1B0GSW2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gm28729A0A1B0GSW2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.45■□□□□ 0.86
Gm28729A0A1B0GSW2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm28729A0A1B0GSW2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28729A0A1B0GSW2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Gm28729A0A1B0GSW2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28729A0A1B0GSW2 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.43■□□□□ 0.86
Gm28729A0A1B0GSW2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm28729A0A1B0GSW2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.43■□□□□ 0.86
Gm28729A0A1B0GSW2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28729A0A1B0GSW2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28729A0A1B0GSW2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.42■□□□□ 0.86
Gm28729A0A1B0GSW2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28729A0A1B0GSW2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Gm28729A0A1B0GSW2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28729A0A1B0GSW2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28729A0A1B0GSW2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm28729A0A1B0GSW2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28729A0A1B0GSW2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Gm28729A0A1B0GSW2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28729A0A1B0GSW2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28729A0A1B0GSW2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28729A0A1B0GSW2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.4■□□□□ 0.86
Gm28729A0A1B0GSW2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm28729A0A1B0GSW2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm28729A0A1B0GSW2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm28729A0A1B0GSW2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.39■□□□□ 0.85
Gm28729A0A1B0GSW2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm28729A0A1B0GSW2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28729A0A1B0GSW2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm28729A0A1B0GSW2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm28729A0A1B0GSW2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28729A0A1B0GSW2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28729A0A1B0GSW2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Gm28729A0A1B0GSW2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28729A0A1B0GSW2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28729A0A1B0GSW2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.37■□□□□ 0.85
Gm28729A0A1B0GSW2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28729A0A1B0GSW2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Gm43017-201ENSMUST00000198296 752 ntBASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 277.2 ms