Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3854A0A1B0GSS6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3854A0A1B0GSS6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3854A0A1B0GSS6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Gm3854A0A1B0GSS6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gm3854A0A1B0GSS6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3854A0A1B0GSS6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Gm3854A0A1B0GSS6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3854A0A1B0GSS6 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.91■□□□□ 0.94
Gm3854A0A1B0GSS6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3854A0A1B0GSS6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3854A0A1B0GSS6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3854A0A1B0GSS6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Gm3854A0A1B0GSS6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3854A0A1B0GSS6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3854A0A1B0GSS6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3854A0A1B0GSS6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3854A0A1B0GSS6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3854A0A1B0GSS6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3854A0A1B0GSS6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3854A0A1B0GSS6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.89■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.89■□□□□ 0.93
Gm3854A0A1B0GSS6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Gm3854A0A1B0GSS6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3854A0A1B0GSS6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm8495-201ENSMUST00000188740 694 ntBASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm43017-201ENSMUST00000198296 752 ntBASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3854A0A1B0GSS6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm18284-201ENSMUST00000172604 624 ntBASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3854A0A1B0GSS6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm7143-201ENSMUST00000222811 859 ntBASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3854A0A1B0GSS6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3854A0A1B0GSS6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm8493-201ENSMUST00000196881 489 ntBASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gm3854A0A1B0GSS6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3854A0A1B0GSS6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3854A0A1B0GSS6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3854A0A1B0GSS6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3854A0A1B0GSS6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.83■□□□□ 0.93
Gm3854A0A1B0GSS6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.83■□□□□ 0.93
Gm3854A0A1B0GSS6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm3854A0A1B0GSS6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3854A0A1B0GSS6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3854A0A1B0GSS6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Gm3854A0A1B0GSS6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3854A0A1B0GSS6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.82■□□□□ 0.92
Gm3854A0A1B0GSS6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.82■□□□□ 0.92
Gm3854A0A1B0GSS6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3854A0A1B0GSS6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3854A0A1B0GSS6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3854A0A1B0GSS6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.81■□□□□ 0.92
Gm3854A0A1B0GSS6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3854A0A1B0GSS6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms