Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv1-88A0A140T8N1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Gm16437-201ENSMUST00000025669 507 ntBASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Igkv1-88A0A140T8N1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Gm9806-201ENSMUST00000051080 552 ntBASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Igkv1-88A0A140T8N1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv1-88A0A140T8N1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Igkv1-88A0A140T8N1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv1-88A0A140T8N1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Gm11687-201ENSMUST00000118911 886 ntBASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv1-88A0A140T8N1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv1-88A0A140T8N1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Igkv1-88A0A140T8N1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms