Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.63■□□□□ 0.89
Ccdc194A0A140LIT1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc194A0A140LIT1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc194A0A140LIT1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc194A0A140LIT1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc194A0A140LIT1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc194A0A140LIT1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.61■□□□□ 0.89
Ccdc194A0A140LIT1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc194A0A140LIT1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc194A0A140LIT1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc194A0A140LIT1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc194A0A140LIT1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc194A0A140LIT1 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.59■□□□□ 0.89
Ccdc194A0A140LIT1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc194A0A140LIT1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc194A0A140LIT1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc194A0A140LIT1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc194A0A140LIT1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.58■□□□□ 0.89
Ccdc194A0A140LIT1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc194A0A140LIT1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc194A0A140LIT1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc194A0A140LIT1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc194A0A140LIT1 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.57■□□□□ 0.88
Ccdc194A0A140LIT1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc194A0A140LIT1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccdc194A0A140LIT1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc194A0A140LIT1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc194A0A140LIT1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc194A0A140LIT1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc194A0A140LIT1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc194A0A140LIT1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccdc194A0A140LIT1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc194A0A140LIT1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc194A0A140LIT1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc194A0A140LIT1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc194A0A140LIT1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc194A0A140LIT1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc194A0A140LIT1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc194A0A140LIT1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc194A0A140LIT1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc194A0A140LIT1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc194A0A140LIT1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc194A0A140LIT1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms