Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv8-27A0A0G2JF28 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv8-27A0A0G2JF28 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv8-27A0A0G2JF28 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Gm9397-201ENSMUST00000200125 605 ntBASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv8-27A0A0G2JF28 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Igkv8-27A0A0G2JF28 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igkv8-27A0A0G2JF28 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv8-27A0A0G2JF28 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 AC152827.1-201ENSMUST00000221143 2189 ntBASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv8-27A0A0G2JF28 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv8-27A0A0G2JF28 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gm44949-201ENSMUST00000206423 1450 ntBASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Igkv8-27A0A0G2JF28 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms