Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Scarna2-201ENSMUST00000157560 414 ntBASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav19A0A0B4J1K4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Gm16437-201ENSMUST00000025669 507 ntBASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav19A0A0B4J1K4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav19A0A0B4J1K4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav19A0A0B4J1K4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav19A0A0B4J1K4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav19A0A0B4J1K4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav19A0A0B4J1K4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav19A0A0B4J1K4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Gm11687-201ENSMUST00000118911 886 ntBASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav19A0A0B4J1K4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav19A0A0B4J1K4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav19A0A0B4J1K4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav19A0A0B4J1K4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav19A0A0B4J1K4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav19A0A0B4J1K4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav19A0A0B4J1K4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms