Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.16□□□□□ -0.14
Trav4-3A0A0B4J1K1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-3A0A0B4J1K1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Terc-201ENSMUST00000082862 423 ntBASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav4-3A0A0B4J1K1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-3A0A0B4J1K1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-3A0A0B4J1K1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Gm4799-201ENSMUST00000095396 657 ntBASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Golph3-202ENSMUST00000226517 2359 ntBASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-3A0A0B4J1K1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-3A0A0B4J1K1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-3A0A0B4J1K1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav4-3A0A0B4J1K1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-3A0A0B4J1K1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-3A0A0B4J1K1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trav4-3A0A0B4J1K1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4-3A0A0B4J1K1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4-3A0A0B4J1K1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav4-3A0A0B4J1K1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4-3A0A0B4J1K1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4-3A0A0B4J1K1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms