Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Trbv20A0A0B4J1H5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv20A0A0B4J1H5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Gm44428-201ENSMUST00000204474 874 ntBASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv20A0A0B4J1H5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv20A0A0B4J1H5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv20A0A0B4J1H5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv20A0A0B4J1H5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv20A0A0B4J1H5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv20A0A0B4J1H5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv20A0A0B4J1H5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv20A0A0B4J1H5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv20A0A0B4J1H5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv20A0A0B4J1H5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv20A0A0B4J1H5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trbv20A0A0B4J1H5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv20A0A0B4J1H5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv20A0A0B4J1H5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv20A0A0B4J1H5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.58■□□□□ 0.56
Trbv20A0A0B4J1H5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv20A0A0B4J1H5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv20A0A0B4J1H5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trbv20A0A0B4J1H5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv20A0A0B4J1H5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv20A0A0B4J1H5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv20A0A0B4J1H5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv20A0A0B4J1H5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Gm8503-201ENSMUST00000118131 455 ntBASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv20A0A0B4J1H5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv20A0A0B4J1H5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms