Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Gm8493-201ENSMUST00000196881 489 ntBASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Gm7143-201ENSMUST00000222811 859 ntBASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.33■□□□□ 0.37
Ighv3-4A0A0A6YXF1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv3-4A0A0A6YXF1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.33■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv3-4A0A0A6YXF1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.27■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv3-4A0A0A6YXF1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.26■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ighv3-4A0A0A6YXF1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-4A0A0A6YXF1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv3-4A0A0A6YXF1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms