Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.06■□□□□ 0.64
Trbc1A0A0A6YWV4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbc1A0A0A6YWV4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Gm45102-201ENSMUST00000207427 857 ntBASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Gm9959-201ENSMUST00000068277 390 ntBASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbc1A0A0A6YWV4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbc1A0A0A6YWV4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trbc1A0A0A6YWV4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbc1A0A0A6YWV4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbc1A0A0A6YWV4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbc1A0A0A6YWV4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbc1A0A0A6YWV4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbc1A0A0A6YWV4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbc1A0A0A6YWV4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.02■□□□□ 0.64
Trbc1A0A0A6YWV4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbc1A0A0A6YWV4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbc1A0A0A6YWV4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trbc1A0A0A6YWV4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trbc1A0A0A6YWV4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.02■□□□□ 0.63
Trbc1A0A0A6YWV4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbc1A0A0A6YWV4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbc1A0A0A6YWV4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbc1A0A0A6YWV4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Trbc1A0A0A6YWV4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Gm40881-201ENSMUST00000223397 166 ntBASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbc1A0A0A6YWV4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbc1A0A0A6YWV4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbc1A0A0A6YWV4 Etf1-202ENSMUST00000180351 108 ntBASIC19■□□□□ 0.63
Trbc1A0A0A6YWV4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19■□□□□ 0.63
Trbc1A0A0A6YWV4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbc1A0A0A6YWV4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trbc1A0A0A6YWV4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbc1A0A0A6YWV4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Gm14117-201ENSMUST00000122417 843 ntBASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbc1A0A0A6YWV4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbc1A0A0A6YWV4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbc1A0A0A6YWV4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.97■□□□□ 0.63
Trbc1A0A0A6YWV4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbc1A0A0A6YWV4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbc1A0A0A6YWV4 Gm7417-201ENSMUST00000192950 473 ntBASIC18.96■□□□□ 0.63
Trbc1A0A0A6YWV4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trbc1A0A0A6YWV4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.96■□□□□ 0.63
Trbc1A0A0A6YWV4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms