Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.92■□□□□ 0.14
Trav21-dv12A0A075B6C4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Cap2-205ENSMUST00000225824 1634 ntBASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav21-dv12A0A075B6C4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav21-dv12A0A075B6C4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav21-dv12A0A075B6C4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav21-dv12A0A075B6C4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav21-dv12A0A075B6C4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav21-dv12A0A075B6C4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms