Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm7332-201ENSMUST00000118351 454 ntBASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-6A0A075B6B2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm27502-201ENSMUST00000183495 199 ntBASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-6A0A075B6B2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trav6n-6A0A075B6B2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav6n-6A0A075B6B2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Cap2-205ENSMUST00000225824 1634 ntBASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-6A0A075B6B2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-6A0A075B6B2 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-6A0A075B6B2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-6A0A075B6B2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6n-6A0A075B6B2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-6A0A075B6B2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-6A0A075B6B2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6n-6A0A075B6B2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-6A0A075B6B2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6n-6A0A075B6B2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-6A0A075B6B2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-6A0A075B6B2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.27■□□□□ 0.04
Trav6n-6A0A075B6B2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-6A0A075B6B2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-6A0A075B6B2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms