Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav4-4-dv10A0A075B651 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4-4-dv10A0A075B651 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4-4-dv10A0A075B651 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.16■□□□□ 0.18
Trav4-4-dv10A0A075B651 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4-4-dv10A0A075B651 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav4-4-dv10A0A075B651 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Trav4-4-dv10A0A075B651 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-4-dv10A0A075B651 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav4-4-dv10A0A075B651 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms